Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTALEVLGGWPVPAAAAAVIGPAGVL--ATHG----------DTARVFALASVTKPLVARAAQVAVEEGVVNLDTPAG---P---PGSTVRHLLAHTSGLAMHSD-------------------------QALARPGTRRMYSNYGFTVLAESVQRESGIEFGRYLTEAVCEPLGMVTTRLDGG----------------------------PAAAGFGATSTVADLAVFAGDLLRPSTVSAQMHADATTVQFPGLDGVLPGYGVQRPNDWGLGFEIRNSKSPHWTGECNSTRTFGHFGQ---SGGFIWVDPKADLALVVLTARDFGDWALDLWPAISDAVLAEYT |
| 3TG9 Chain:A ((4-318)) | -HLHTIMEDWKLSGTAL-MKKGEDIPFIASLGFANRAERIPNEHHTRFGIASGCKLFTAIAICQLVEAGKLSFDTPLSDWLDAPFPNVTIHHLLTHTSGVPDYFDEDLWKDVPMYHLRRLKDFLPLFQHAPMKFPPGHRFHYNNAGFILLGLVVESVSGVTFQEYVEANVFQRAGMHESGYFAFDTLPAKTALGYIDLEDGSWKTNLYSLPVIGGSDGGAYVTAEDMMKLWLALMRHELLNETYTQKLLTPHVHC----------EDDDYYGYGVWIKQQDG--------AISKYHVMGYDPGVCFHSAFYPTSNGIVVVCANQSSGA------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TG9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123947 for 1952 contacts (-63.5/contact) +
2D Compatibility (PS) -25205 + (NN) -11317 + (LL) 2208
1D Compatibility (HY) -9600 + (ID) 2850
Total energy: -170711.0 ( -87.45 by residue)
QMean score : 0.376
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