Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDVLRTPDSRFEHLVGYPFAPHYVDVTAGDTQPLRMHYVDEGPGDGPPIVLLHGEPTWSYLYRTMIPPLSAAGHRVLAPDLIGFGRSDKPTRIEDYTYLRHVEWVTSWFENLDLHDVTLFVQDWGSLIGLRIAAEHGDRIARLVVANGFLPAAQGRTPLPFYVWRAFARYSP------VLPAGRLVN-----FGTVHRVPAGVRAGYDAPFPDKTYQAGARAFPRLVPTSPDDPAVPAN-RAAWEALGRWDKPFLAI-----FGYRDPILGQADGPLIKHIPGAAGQPHARIKASHFIQEDSGTELAERMLSWQQAT |
| 3WIB Chain:A ((30-297)) | ---------------------------------LQIHTVEHG--SGAPIVFLHGNPTSSYLWRHIFRRLHGHG-RLLAVDLIGYGQSSKPDI--EYTLENQQRYVDAWFDALDLRNVTLVLQDWGAAFGLNWASRNPDRVRAVAFFEPVLRNIDSVDLSPEFVTRRAKLRQPGEGEIFVQQENRFLTELFPWFFLTPLAPEDLRQ-YQTPFPTPHSRKAILAGPRNLPVDGEPASTVAFLEQAVNWLNTSDTPKLLLTFKPGFLLTDAILKWSQVTIRNLEIEAAG------AGIHFVQEEQPETIARLLDAW---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WIB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158043 for 2051 contacts (-77.1/contact) +
2D Compatibility (PS) -26298 + (NN) -6235 + (LL) 2272
1D Compatibility (HY) -16000 + (ID) 4350
Total energy: -208654.0 ( -101.73 by residue)
QMean score : 0.379
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