Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIADEIQSGLACTGYPFACDHGGVLPDIYLLGKTLGGGAVPLSAMVADREIFGVVHPGEHGSTFGGNPLAAAIGTPVVSMVVWGECQARSAKLGAHLHQRLADLIGDGAVALRGLGWWADVDIERALAIGT-DMSMRLADRGVLLKDTYGAALRFAPPLVITAQEIDCAVRRFADALWEAGS
2BYL Chain:C ((260-430))
FIADEIQTGLARTGRWLAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPGEHFSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKLPSDVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPTHGDIIRFAPPLVIKEDELRESIE-----------
General information:
TITO was launched using:
RESULT:
Template:
2BYL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92213 for 1129 contacts (-81.7/contact) +
2D Compatibility (PS) -17958 + (NN) -4897 + (LL) 824
1D Compatibility (HY) -13600 + (ID) 3450
Total energy: -131294.0 ( -116.29 by residue)
QMean score : 0.181
(partial model without unconserved sides chains):
PDB file :
Tito_2BYL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BYL-query.scw
PDB file :
Tito_Scwrl_2BYL.pdb
: