Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSLTLSEASCIASASRWRHIIPAGVVCALIAGIGVGCHGGPSDVVGRAGPDRAHTSITLVAYAVPEPGWSAVIPAFNASEQGRGVQVITSYGASADQSRGVA---DGKPADLVNFSVEPDIARLVKAGKVDK--DW--DAD----------ATKGIPFGSVVTFVVRAGNPKNIRDWDDLLRPGI--EVITPSPLSSGSAKWNLLAPYAAKSDGGRNNQAGIDFVNTLVNEHVKL-RPGSGREATDVFVQGSGDVLISYENEAIATER---------AGKPVQHVTPP--Q-TFKIENPLAVVATSTHLGAATAFRNFQYTVQAQKLWAQ-AGFRPVDPAVAADFADLFPVPAKLWTIADLGGWGSVDPQLFDKATGSITKIYLRATG |
| 1Y9U Chain:A ((6-284)) | -------------------------------------------------------DEVSLYTTRE-PKLIQPLLDAFAKD-SGIKVNTVFV--K-DGLLERVRAEGDKSPADVLMTVDIGNLIDLVNGGVTQKIQSQTLDSVVPANLRGAEGSWYALSL-RDRVLYVEKDLKLDSFRYGDLADPKWKGKVCIRSGQ-HPYNT-ALVAAMIA--HDG--AEATEKWLRGV-KANLARKAAGGDRDVARDILGGICDIGLANAYYVGHMKNAEPGTDARKWGDAIKVVRPTFAGGTHVNISGAAVAAHAPNKANAVKLLEYLVSEPAQTLYAQANYEYPVRAGVK---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Y9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59279 for 1943 contacts (-30.5/contact) +
2D Compatibility (PS) -26904 + (NN) -12552 + (LL) 5444
1D Compatibility (HY) -8400 + (ID) 2300
Total energy: -103991.0 ( -53.52 by residue)
QMean score : 0.350
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