Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGGTFDPIHYGHLVAASEVADLFDLDEVVFVPSGQPWQKGRQVSAAEHRYLMTVIATASNPRFSVSRVDIDRGGPTYTKDTLADLHALHPDSELYFTTGADALASIMSWQGWEELFELARFVGVSRPGYELRNEHITSLLGQLAKDALTLVEIPALAISSTDCRQRAEQSRPLWYLMPDGVVQYVSKCRLYCGACDAGARSTTSLAAGNGL
3MLA Chain:B ((9-189))
IGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPP----NITSVESRLQMLELATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEALLDLVTFVGVARPGYKLRTPY-----------PITTVEIPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLY--------------------
General information:
TITO was launched using:
RESULT:
Template:
3MLA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125894 for 1315 contacts (-95.7/contact) +
2D Compatibility (PS) -19011 + (NN) -8713 + (LL) 1436
1D Compatibility (HY) -15200 + (ID) 3550
Total energy: -170932.0 ( -129.99 by residue)
QMean score : 0.490
(partial model without unconserved sides chains):
PDB file :
Tito_3MLA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MLA-query.scw
PDB file :
Tito_Scwrl_3MLA.pdb
: