Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGEGSRRPSGMLMSVDLEPVQLVGPDGTPTAERRYHRDLPEETLRWLYEMMVVTRELDTEFVNLQRQGELALYTPCRGQEAAQVGAAACLRK-TDWLFPQYRELGVYLVRGIPPGHV---GVAWRGTWHGGLQFT----TKCCAPMSV--PIGTQTLHAVGAAMAAQRLDEDSVTVAFLGDGATSEGDVHEALNFAAVFTTPCVFYVQNNQWAISMPVSRQTAAPSIAHKAIGYGMPGIRVDGNDVLACYAVMAEAAARARAGDGPTLIEAVTYRLGPHTTADDPTRYRSQEEVDRWATLDPIPRYRTYLQDQGLWSQRLEEQVTARAKHVRSELRDAVFDAPD---FDVDEVFTTVYAEITPGLQAQREQLRAELARTD |
1UM9 Chain:C ((14-367)) | -----------------EPIRLIGEEGEWLGD--FPLDLEGEKLRRLYRDMLAARMLDERYTILIRTGKTSFIAPAAGHEAAQVAIAHAIRPGFDWVFPYYRDHGLALALGIPLKELLGQMLATKADPNKGRQMPEHPGSKALNFFTVASPIASHVPPAAGAAISMKLLRTGQVAVCTFGDGATSEGDWYAGINFAAVQGAPAVFIAENNF-------------PTIADKAHAFGIPGYLVDGMDVLASYYVVKEAVERARRGEGPSLVELRVYRYGPHSSADD-------------RKKDPIPRFRRFLEARGLWNE---EWEEDVREEIRAELERGLKEAEEAGPVPPEWMFEDVFAEKPWHLLRQEALLKEEL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UM9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148889 for 2659 contacts (-56.0/contact) +
2D Compatibility (PS) -34393 + (NN) -18191 + (LL) 3600
1D Compatibility (HY) -18400 + (ID) 6550
Total energy: -222823.0 ( -83.80 by residue)
QMean score : 0.461
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