Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAELTETSPETPETTEAIRAVEAFLNALQNEDFDTVDAALGDDLVYENVGFSRIRGGRRTATLLRRMQGRVG-FEVKIHRIGADGAAVLTERTDAL-IIGPLRVQFWVCGVFEVD-DGRITLWRDYFDVYDMFKGLLRGLVALVVPSLKATL
5AIF Chain:B ((4-117))
-----------------IETVTAFIAHWNSGDMEAMYDLCAEDVVWHNIPMEPIAGKPAMRAAVEGFMANVSQCDWQVHAIAANGATVLTERTDGFTFTNGRRATIRVMGTFECDAERRIIAWRDYFDMLE---------------------
General information:
TITO was launched using:
RESULT:
Template:
5AIF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56506 for 745 contacts (-75.8/contact) +
2D Compatibility (PS) -12463 + (NN) -6378 + (LL) 3172
1D Compatibility (HY) -11600 + (ID) 1850
Total energy: -85625.0 ( -114.93 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_5AIF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5AIF-query.scw
PDB file :
Tito_Scwrl_5AIF.pdb
: