Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGRPLHAFEVVATRHLAPHMVRVVLGGSGFDTFVPSDFTDSYIKLVFVDDDVDVGRLPRPLTLDSFADLPTAKRPPVRTMTVRHVDAAAREIAVDIVLHGEHGVAGPWAAGAQRGQPIYLMGPGGA-YAPDP--AADWHLLAGDESAIPAIAAALEALPP---DAIGRAFIEVAGPDDEIG---L---TA--PDAVEVNWVYRGGRADLVPEDRAGDHAP-LIE-AVTTT----AWLPGQVHVFIHGEAQAVMHNLRPYVRNERGVDAKWASS------ISGYWRRGRTEEMFRKWKKELAEAEAGTH |
| 1FDR Chain:A ((2-248)) | ---ADWVTGKVTKVQNWTDALFSLTVHAP-VLPFTA----GQFTKLGLEI-------------------------RVQRAYSYVNSPDN-PDLEFYLVTVP-DGKLSPRLAALKPGDEVQVVSEAAGFFVLDEVPHCETLWMLATGTAIGPYLSILRLGKDLDRFKNLVLVHAARYAADLSYLPLMQELEKRYEGKLRIQTVVSRETAAGSL---TG-RIPALIESGELESTIGLPMNKETSHVMLCGNPQ-MVRDTQQLLKETRQMT-KHLRRRPGHMTAEHYW------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FDR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134005 for 1741 contacts (-77.0/contact) +
2D Compatibility (PS) -23929 + (NN) -11897 + (LL) 3672
1D Compatibility (HY) -7200 + (ID) 1500
Total energy: -174859.0 ( -100.44 by residue)
QMean score : 0.351
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