Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRARPLTLLTALAAVTLVVVAGCEARVEAEAYSAADRISSRPQARPQPQPVELLLRAITPPRAPAASPNVGFGELPTRVRQATDEAAAMGATLSVAVLDRATGQLVSNGNTQIIATASVAKLFIADDLLLAEAEGKVTLSP------------------------EDHHALDVMLQSSDDGAAERFWSQDGGNAVVTQVARRYGLRSTAPPS-D-------GRWWNTISSAPDLIRYYDMLLDGSGGLPLDRAAVIIADLAQSTPTGIDGYPQRFGIPDGLY-AEPVAVKQGWMC--CIGSSWMHLSTGVI-GPER-RYIMVIESLQPADDATARATITQAVRTMFPNGRI |
| 3DW0 Chain:A ((30-268)) | ---------------------------------------------------------------------------AEPFAKLEQD---FGGSIGVYAMDTGSGATVSYRAEERFPLCSSFKGFLAAAVLARSQQQAGLLDTPIRYGKNALVPWSPISEKYLTTGMTVAELSAAAVQYSDNAAANLLLKELGGPAGLTAFMRSIGDTTFRLDRWELELNSAIPGDARDTSSPRAVTESLQKLTLGS-ALAAPQRQQFVDWLKGN------TTG-NHRIRAAVPADWAVGDKTGTCGVYG-----TANDYAVVWPTGRAPIVLAVYTRAP----------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3DW0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -93965 for 1662 contacts (-56.5/contact) +
2D Compatibility (PS) -22468 + (NN) -13500 + (LL) 8004
1D Compatibility (HY) -1200 + (ID) 1850
Total energy: -124979.0 ( -75.20 by residue)
QMean score : 0.509
|
|
|