Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVRIEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
2XZW Chain:E ((1-111))
MKKIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGR--------------VEFLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQTIRIRTGEKNADA-
General information:
TITO was launched using:
RESULT:
Template:
2XZW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59520 for 627 contacts (-94.9/contact) +
2D Compatibility (PS) -10736 + (NN) -3153 + (LL) 912
1D Compatibility (HY) -12400 + (ID) 2900
Total energy: -87797.0 ( -140.03 by residue)
QMean score : 0.573
(partial model without unconserved sides chains):
PDB file :
Tito_2XZW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XZW-query.scw
PDB file :
Tito_Scwrl_2XZW.pdb
: