Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MTEQEMTEQWLEGCAVQRIMFRDGLVLNFDDYNELVISVPLQLTLPAIETSPAEVVAIDPNDPADHERPLFDFAGATCTAFVWYDTGDLHLEFSDGHQIDVHPDDRVTAWELYGKYHGYAACLAPGKLRVVRHDVADANGDQ
5IEU Chain:A ((46-153))
KVMRIGTMIKQLLEEVR----------------------AAPSRNRLRDIHATSIRELEDGLAPELREELD--------------------RLTLPVPSDAELRIAQAQLVGWLEGLFHGIQTALFAQQMAARAQLQQMRQ---
General information:
TITO was launched using:
RESULT:
Template:
5IEU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4192 for 540 contacts (7.8/contact) +
2D Compatibility (PS) -10363 + (NN) -2829 + (LL) 3072
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -7878.0 ( -14.59 by residue)
QMean score : -0.048
(partial model without unconserved sides chains):
PDB file :
Tito_5IEU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5IEU-query.scw
PDB file :
Tito_Scwrl_5IEU.pdb
: