Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGAIMLDGKATRDEIFGDLKQRVAALDA--AGRTPGLGTILVGDDPGSQAYVRGKHADCAKVGITSIRRDLPADISTATLNETIDELNANPDCTGYIVQLPLPK--HLDENAALERVDPAKDADGLHPTNLGRLVLGT--PAPLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDLPALTRQADIVVAAVGVAHLLTADMVRPGAAVIDVGVSRTDDGLVGDVHPD-VWELAGHVSPNPGGVGPLTRAFLLTNVVELAERR |
1A4I Chain:A ((2-294)) | APAEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEIGIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLW--NNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMVKGEWIKPGAIVIDCGINY---KVVGDVAYDEAKERASFITPVPGGVGPMTVAMLMQSTVESAKRF |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1A4I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -178636 for 2423 contacts (-73.7/contact) +
2D Compatibility (PS) -29514 + (NN) -7588 + (LL) -28
1D Compatibility (HY) -17600 + (ID) 5150
Total energy: -238516.0 ( -98.44 by residue)
QMean score : 0.496
|
|
|