Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAIDPNSIGAV-TE-PMLFEWTDRDTLLYAIGVGAGTGDLAFTTENSH---GI-DQQVLPTYAVICCPAFGAAA-KVGTFNPAALLHGSQGIRLHAPLPAAGKLSVVTEVADIQDKGEGKNAIVVLRGRGCDPESGSLVAETLTTLVLRGQGGFGGA-------------------RGE-R-P---AAP------E-FPDRHP-----------D---ARIDMPTREDQALIYRLSGDRNPLHSDPWFATQLAGFPKPILHGLCTYGVAGRALVAELGGGVAANITSIAARFTKPVF---PGETLSTVIWRTEP---GRAVFRTEVAGSDGAEARV-VLDDGAVEYVAG |
| 4V12 Chain:A ((9-341)) | --STLESRVGHYYQMEDTYLVGREKVREFARAVQDY--HPAHWNLATAADLGHPGLIAPLTFTSAPAMACNQRMFESVVVGYDMYLQTEEVFEQHRPIVEGDELSIDIELTSVRRIAG--RDLITVTNTFTDT-AGEVVHTLHTTVVGITAEDVDPAIRPAVQGVMMHGINMLGVEETNAPYEKTVRPEGELRIAQGGATRTPTSLNFDDLKVGEELPVHTARLSRGDLVNYAGVAGDANPLHWDENIAKL-AGQPDVIAHGMLTMGLGAGFVSSWSGD--PGAITRYAVRLSQPAVVPAEGTEIEYSGRIKSLDPETRTGVVIVAAKSG---GRKIFGL-ATATIR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V12.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100271 for 2164 contacts (-46.3/contact) +
2D Compatibility (PS) -29080 + (NN) -10520 + (LL) 396
1D Compatibility (HY) 1200 + (ID) 2550
Total energy: -140825.0 ( -65.08 by residue)
QMean score : 0.350
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