Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MREFGNPLGDRPPLDELARTDLLLDALAEREEVDFADPRDDALAALLGQWRDDLRWPPASALVSQDEAVAALRAGVAQRRRARRS----LAAVGSVAAALLVLSGFGAVVADARP-GDLLYGLHAMMFNRSRVSDDQIVLSAKANLAKVEQMIAQGQWAEAQDELAEVSSTVQAVTDGSRRQDLINEVNLLNTKVETRDPNATLRPGSPSNPAAPGSVGNSWTPLAPVVEPPTPPTPASAAEPSMSAGVSESPMPNSTSTVAASPSTPSSKPEPGSIDPSLEPADEATNPAGQPAPETPVSPTH |
4HTP Chain:A ((7-237)) | ----SQTVASHVPFADLCS---TLERIQKSKG---RAEKIRHFREFLDSWRKFHDALHKNHKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPRDGKDALKLLNYGDFAMIAYFVLKPRCL-------QKGSLTIQQVNDLLDSIASNNSAKRKDLIKKSLLQLITQSSALEQKWLIRMIIKDLK---------------------LGVSQQTIFSVFHNDAAELHNVT---------------TDLEKVCRQLHDPSVGLSD------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4HTP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -8721 for 1638 contacts (-5.3/contact) +
2D Compatibility (PS) -23834 + (NN) -13729 + (LL) 1560
1D Compatibility (HY) -7200 + (ID) 1350
Total energy: -53274.0 ( -32.52 by residue)
QMean score : 0.203
|
|
|