Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKDGAIEVEGRVVEPLPNAMFRIELENGHKVLAHISGKMRQHYIRILPEDRVVVELSP-YDLSRGRIVYRYK
2DGY Chain:A ((22-89))
-----SNQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRKN-IWIKRGDFLIVDPIEEGEKVKAEISFVLC
General information:
TITO was launched using:
RESULT:
Template:
2DGY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29568 for 408 contacts (-72.5/contact) +
2D Compatibility (PS) -7199 + (NN) -138 + (LL) 496
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -39459.0 ( -96.71 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_2DGY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DGY-query.scw
PDB file :
Tito_Scwrl_2DGY.pdb
: