Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQPMTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAEPQTGIEVHKYGAHLFHTSNKRVWDYVRQFTDFTDYRHRVFAMHNGQAYQFPMGLGLVSQFFGKYFTPEQARQLIAEQAAEIDTADAQNLEEKAISLIGRPLYEAFVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDGYTAWLQNMAADHRIEVRLNTDWFDVRGQLRPGSPAAPVVYTGPLDRYFDYAEGRLGWRTLDFEVEVLPIGDFQGTAVMNYNDLDVPYTRIHEFRHFHPERDYPTDKTVIMREYSRFAEDDDEPYYPINTEADRALLATYRARAKSETASSKVLFGGRLGTYQYLDMHMAIASALNMYDNVLAPHLRDGVPLLQDGA |
| 4MO2 Chain:A ((2-363)) | -------YDYLIVGSGLFGSIFAYE-ATEKGYTCLVVEQREHIGGNCYTEN--IKNINVHKYGAHIFRTSDQNIWDYMNQFCEFNHFINSPIAIYKDEIYNLPFNMNTFSKLWG-IKTPNEARKII-EMQKQIIQHPPKNLEEQAISLVGTDVYEKLIKGYTEKQWGRSCKDLPASIIRRLPVRYIYDNNYFNDPYQGIPKGGYTAIFDKMLKKSK--VILNTDF--LKYKDKFKNKAKKIVFTGCIDAYYDYRYGALEYRSLKFEHKILNLDNFQGVAVVNYTDKEIPYTRIIEHKHFEFGN---TDTTVISEEYPLEWIKGIEPYYPINDEKNQALYEKYKQLAKHE---SNVYFGGRLGEYRYYDMQDVVRSALLFCKNEL--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MO2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158567 for 2990 contacts (-53.0/contact) +
2D Compatibility (PS) -39445 + (NN) -20415 + (LL) 1960
1D Compatibility (HY) -39200 + (ID) 8300
Total energy: -263967.0 ( -88.28 by residue)
QMean score : 0.485
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