Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSTVQAIRTVLFYLLLSASAFVWGTLSFFIAPILPFRARY----RFVVQNWCRFAIWL-------TRVVAGIRYEVRGLENIPEKPCVILSKHQSTWETFFLSGFFEPLS--QVLKRELLYVPFFGWALALLKPIAIDRSQPKLALKQLAKQGDECLKKGAWVLIFPEGTRIPVGQMGKFSRGGTALAVNAGLPVLPIAHNAGQYWPKAGWAKYPGT-IQVVIGPAMHAEGEG---------PRAIAELNQRAEAWVSETMAEISPIQQRVSHPEPSVVS-- |
| 2LGZ Chain:A ((1-273)) | MGSSHHHHHHSSGLVPRGSHSTWVTRTAYSSPSVVLPSQTPDGKLALIDDFREAYYWLRMNSDEDSKVAAWWDYGYQIGGMADRTTLV----DNNTWNNTHIAIVGKANASPEEKSYEILKEHDVDYVLVIFGGLIGFGGDDINKFLWNIR-----ISEGIWPEEIKERDFYTAEGEYRVDARASETMRNSLLYKMSYKDFPQLFNGGQATDRVRQQMITPLDVPPLDYFDEVFTSENWNVRIYQLKKDDAQGRTLRDVGELTRSSTKTRRSIKRPELGLRV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LGZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119504 for 1863 contacts (-64.1/contact) +
2D Compatibility (PS) -24962 + (NN) -3223 + (LL) 448
1D Compatibility (HY) 1600 + (ID) 1450
Total energy: -147091.0 ( -78.95 by residue)
QMean score : 0.168
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