Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSHSAKKALLPLLAVATLAGLAGCATETSTALPVQQVESVNRPYSGVRSPIAVGKFDNRSSYMRGIFSDGVDRLGGQAKTILITHLQQTNRFNVLDRDNMSEIQQEAAIKGQAQRLKGADYVVTGDVTEFGRKEVGDRQLFGILGRGKSQIAYAKVALNIVNISTSEVVYSTQGAGEYALSNREVIGFGGTASYDSTLNGKVLDLAMREAVNKLVNAVDSGAWKPQNQ |
1P9C Chain:A ((263-307)) | ---------------------------------------------------------------------------------MTISQQEFGRTGLPDLSSMT--EEEQIAYAMQMSLQGA---------EFGQAESAD------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1P9C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8349 for 187 contacts (44.6/contact) +
2D Compatibility (PS) -4758 + (NN) -825 + (LL) 11196
1D Compatibility (HY) 400 + (ID) 650
Total energy: 13712.0 ( 73.33 by residue)
QMean score : 0.298
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