Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSRHGLLRSLFAAAALLGAAGVFAASAEPLRLEVYNPGEKAIFAVSSELLVGQREAMLIDAQFSRADAEQLVKRIQA-SGKTLSTIYISHGDPDFYFGLDVLKAAFPEAKILATAQTVAHIQATKDAKLAYWGPILKDNAPTSLVVPEPLKGDQLKLEGHALKVVD-LKGPSPDRTVLWIPSLKTVVGGVLVESGSHVWTADTQTQASRQAWVAMLDRIEA------LQPRRVVPGHFTGEEPKGLDGVRFTRDYLKALEAELPKARDSAALVEAMKRRYPNLPGEEGLELSAKVLKGEMQWP |
3Q6V Chain:A ((24-230)) | ------------------------------------------VQENSMVYIGTDGITIIGATWTPETAETLYKEIRKVSPLPINEVINTNYHTDRAGGNAYWKTL--GAKIVATQMTYDLQKSQWGSIVNFTRQGNNKYPNLEKSLPDTVFPGDFNLQNGSIRAMYLGEAHTKDGIFVYFPAERVLYGNCILKENL-GNMS----FANRTEYPKTLEKLKGLIEQGELKVDSIIAGHDTPIHD-----VGLIDHYLTLLEKAP---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -81877 for 1683 contacts (-48.6/contact) +
2D Compatibility (PS) -21337 + (NN) -9641 + (LL) 6236
1D Compatibility (HY) -10000 + (ID) 1800
Total energy: -118419.0 ( -70.36 by residue)
QMean score : 0.449
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