Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MSAPLPPRGRGTASNPLNRFAPTHSEAFDDGWEQDVPPIQLTEVREEIARTVI--SRNQSPDLPFDRSINPYRGCEHGCIYCYARPSHAYWDLSPGIDFETRLIAKSNVASALEQELSKPGYRCAPINLGANTDPYQPLERERRLTRQVLE-VLLRFRHPLTIVTKGSLILRDLDLLRELAEQNLVAVMISLTTLDDELKRILEPRAAAPSARLRAIRTLSGNGIPVG----------VLCSPMIPMVNDMELERLLQAARDAGARSAAYM---------LLRLPREVGPLFEEWLAAHYPQRAEHVMSLVRQCRGGEVYDSRFGHRFRGQGPFADLLAQRFAVAMKRLGLDRREGFGLDCSRFAVPGAQMALF |
| 4UVJ Chain:A ((2-387)) | DSVKEIVLPLFYDLLNAASILCPLLESFIT--FSETELKKITDKTIKAFMDSTIGNSKVDMKYDIFAKFIHHIHHFEKKELQEKFLNQIATLKIHLKKFLQEKM--DPNNSRDDYKDLTCSLYELYINKLTILGRDY-PIEVDEELLQLFLNNFVSRIPIMFQDFDDSTAQEINFKMLVLLATWNLEKWREIIEKVRD-LRSVWKPIAAIIGRLNTLVISLAATNETFENINSLFYLKWSACTSLMDIIVAIKIFELKLPADATTWRYSMSEQFPFYLHDNASKVLLKIFLYLESLFAKQVDVQLERVADEDANLN--DLPETGF---FENIETEFLLFTVKLKGLMKLNILDERFASRVALNKEKLGPLFKKIV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UVJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92412 for 2449 contacts (-37.7/contact) +
2D Compatibility (PS) -34656 + (NN) 8611 + (LL) -48
1D Compatibility (HY) -11600 + (ID) 2250
Total energy: -132355.0 ( -54.04 by residue)
QMean score : 0.151
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