Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPLRLTITSYHKLTPGQCSEKVLD-QGQLTIGRGP------DNDWVLPDPERLVSSRHCTILNRDGV----YYLTDTST-NGVLLVNAGHRLRRGNSEPLQDGETVRLGEYDILVQLGHDIALPGSGNPQTDPFTSFDALMSRQAAGSAPAFAEPAPTPHPAVTAHFQGGSPLDTKPDLFDFLTPPPPGAAPRPDHVPAEQHDFRPPEPVIPPPPATTPAPPPAGGAPLIPADWDPFAELLGNTPAPSATPVAQPLPTAEPTPLAMPFADPGITQQPQPQPQPQPQPQPQPQPQPQPASVAAPTPPASAAASAGGDLLQAFLRGAGMTQLKVDPAGAEAQMEAIGRSYRGLVEGLVDVLRARASLKGEFRMAQTMIQPVQNNPLKFAPNVDEAMLLLLRRDNQAFMAPDRAVADSFEDLKAHQLAVMAGVQAAIRHLLARFEPAALEARFGKPAGLSGLLPGARQAQNWDSFTELYAKILREAEDDFQELFGREFSRAYEEHSARLRRS |
| 3ELS Chain:A ((32-145)) | --YELVIYRKNDKDKGPWKRYDLNGRSCYLVGRELGHTEIVVADIGIPE--ETSSKQHCVIQFRNVRGILKCYVMDLDSSNGTCLNN--VVIPGARYIELRSGDVLTLSEFEEDNDYELIFMNV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ELS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28504 for 613 contacts (-46.5/contact) +
2D Compatibility (PS) -10024 + (NN) -2924 + (LL) 18024
1D Compatibility (HY) -4400 + (ID) 1150
Total energy: -28978.0 ( -47.27 by residue)
QMean score : 0.550
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