Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQALSIVASGMVSAVG-LSAPASCAAIRCALDNFQETRFIDQGGEWLLAASVPLEQPWRGRAKLLKMAARAIDEALRGQPDLDCTELPLLLCVAEGDRPGRCAGLDESFLRDLEGELGRRFHPSSALIARGRVGGAVALLNARKLI-QGGCRQVLVAGVDSFVSGPTLAAYEARERLLTSQNSNGFIPGEGAAAVLVAAPLH-EEAPQLLCIG-LGFG----V-------EKA--------TVESE-DLPLRADGLSQAVRAALAEAGCGLEQMDYRLTDISGEQYYFKEASLTLSRNLRVLKPKFDLWHPADCIGECGAAIGPALLAVALAASRKGYGDGPNVFCHLGNDAGERAAALLSYRRVRAA |
| 1UB7 Chain:A ((2-321)) | ----SGILALGAYVPERVMTNADFEAYLDTSDEWI-----VT-------RTGIKERRVAAEDEYTSDLAFKAVEDLLRRHPGALEGVDAVIVATNTPD------ALFPDTAALVQARFGLK--AFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEALSKIID-----------WNDRATAVLFGDGGGAAVVGKVREGYG-FRSFVLGADGTGAKELYHACVAPRLPDGTSMKNRLYMNGREVFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRIIDAAR-----ERLGLP--WERVAVNVDRYGNTSTASIPLALKEAVDAGR--IREGDHVLLVSFGAGLTWAAAVLTWGGA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UB7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168134 for 2784 contacts (-60.4/contact) +
2D Compatibility (PS) -31797 + (NN) -14065 + (LL) 3808
1D Compatibility (HY) -6000 + (ID) 2450
Total energy: -218638.0 ( -78.53 by residue)
QMean score : 0.338
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