Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLINTQVQPFKVNAFHNGKFIEVTEESLKGKWSVLIFMPAAFTFNCPTEIEDAANNYGEFQKAGAEVYIVTTDTHFSHKVWHETSPAVGKAQFPLIGDPTHQLTNAFGVHIPEEGLALRGTFVINPEGVIKTVEIHSNEIARDVGETVRKLKAAQYTAAHPGEVCPAKWKEGEKTLAPSLDLVGKI
4MAB Chain:C ((1-186))
-SLINTKIKPFKNQAFKNGEFIEVTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTGALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAAHPGEVAPAKWKEGEATLAPSLDLVGKI
General information:
TITO was launched using:
RESULT:
Template:
4MAB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108278 for 1380 contacts (-78.5/contact) +
2D Compatibility (PS) -20270 + (NN) -4665 + (LL) 208
1D Compatibility (HY) -16400 + (ID) 5500
Total energy: -154905.0 ( -112.25 by residue)
QMean score : 0.648
(partial model without unconserved sides chains):
PDB file :
Tito_4MAB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MAB-query.scw
PDB file :
Tito_Scwrl_4MAB.pdb
: