Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLPAMRTGLLCALLGVTAPAWAEYVTVISFGGANKEAQETAFYKPFKSATGNRVVHGSYNGDLAKLKRMVEISHVSWDVVEVEA-PELARGCEEGLFEKLDMAKVGDPADFVPGA----VQPCGVGIFVWTTLLAYNPGKVAG-SPQGWADFWDVKKFPGKRGLRWGAKYSLEFALMADGVAPKDVYQTLATPAGVERAFRKLDELKPYI-H-WWKSGQDPVRDLADGTVVMSSAYNGRIAAAQAEK--------QRLAMVWS-------GGVYDFDFWALPVGVWKKQLAEEFIRFASQPEQQKAFAENIAYGPANRKAVGLLDPQVAANLPTAPQNMQNAVGMNVAFWAEHGEALEQRFQNWAKR |
| 2VOZ Chain:A ((34-344)) | ----------------------RTINLYSSRHY---NTDDALYDAFGE---VNLIEASAEELIERIQSEG-ANS-PGDILFTVDAGMLWRAEQAGLFQPVRSGKLN--ERIPENLRHPDGLWYGFT--QRARVLYYSRDRVNPADLSTYEALADPQ-WRGKILVRPS-SNVYNLSLTASRIA----------IHGEPETRRWLQGLVGNFARQPEGNDTAQIRAIAAGIGDVAIANSYYYIRLQKSTDPADQEVVEKVSLFFPNTGSGERGTHVNVSGAGVLKNAPNRDAAIAFLEYLASDDAQRYFAEGNNEYPVIPGVPI--DPVLAAHGQ-----L-KGDPLNVSNLGRYQPDSARLMNEVGWQ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2VOZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -86535 for 2468 contacts (-35.1/contact) +
2D Compatibility (PS) -31701 + (NN) -12850 + (LL) 3980
1D Compatibility (HY) -6400 + (ID) 2300
Total energy: -135806.0 ( -55.03 by residue)
QMean score : 0.423
|
|
|