Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDSRQSAMVKLFLASYDDFKARLKRRLGSEDLACDVLHETYLRVDRLDDALEVKKPQAYLFRIALNIAADRREGDARLLTGEEVAELLQVADEGLDPERIVGGHAEIRRLLEALCELPARRRQILIASRLEETPHAEISRRFGISTRTVEKELKAALWFCAERLERKVIQRFGPGAGKPS
2O8X Chain:A ((5-61))
----------------------------------------------------------------------------------------------------------DLVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLA------------------
General information:
TITO was launched using:
RESULT:
Template:
2O8X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16978 for 375 contacts (-45.3/contact) +
2D Compatibility (PS) -6472 + (NN) -4605 + (LL) 8928
1D Compatibility (HY) -2000 + (ID) 400
Total energy: -21527.0 ( -57.41 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_2O8X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O8X-query.scw
PDB file :
Tito_Scwrl_2O8X.pdb
: