Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRASFVLLALSCAAPLLSLAEPLRFAGD-DGCPYLCPG-TPQRPGYLVEALSQVLR---EPPHFDSLPWPRAVQMVRDGHRDGLVGA-YGL----DGLRVGSEPIGWVGLAFYTRHDSDWHYSGDASLLGQRLGLAQ--GYVNNPRFEAWRSQAGDDDLHLQVLGGERVLPRNLQKLLLGRIDVLLEDRDIIEHYLEHHPQLAGQIRRAGELPGRQPLHVGLSPHLPEVDARLAELDEGLRQLRREGTLKVLGERYRLSFE |
| 3K4U Chain:A ((3-230)) | -------------------LRGELRVGLEPGYLPFEMKDKKGNVIGFDVDLAREMAKAMGVKLKLVPTSWDGLIPGLVTEKFDIIISGMTISQERNLRVNFV-EPYIVVGQSLLVKKGLEKGVKSYKDLDKPELTLVTKFGVSAEYAAKRLFK-------NAKLKT-YDTEAEAVQEVLNGKADMFIFDLPFNVAFMAQK-GQ-GYLVHLDTSLTYEPLGWAIKKG---DPDFLNWLNHFLAQIKHDGSYDELYERWFVDTK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77301 for 1673 contacts (-46.2/contact) +
2D Compatibility (PS) -23111 + (NN) -8231 + (LL) 2080
1D Compatibility (HY) -10000 + (ID) 1600
Total energy: -118163.0 ( -70.63 by residue)
QMean score : 0.335
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