Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKLCNVVVLISGSGSNLQALIDSLRDGATPARIRAVISNRADAYGLERARQAGIQTEVLDHKAYADRESFDEALAQRIDAHEPHLVILAGFMRILSADFVRHYQGRLLNIHPSLLPRHKGLHTHQRALEAGDREHGCSVHFVTEELDGGPLVVQAVIPVESQDTPERLARRVHEEEHRIYPLAMRWFAEGRLRLGEQGALLDGQALPATGHQIRTKEIRNA
1ZLY Chain:A ((3-197))
------VAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAEDVDAGQIILQEAVPVKRGDTVATLSERVKLAEHKIFPAALQLVASGTVQLGENGKICWV------------------
General information:
TITO was launched using:
RESULT:
Template:
1ZLY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -145478 for 1558 contacts (-93.4/contact) +
2D Compatibility (PS) -21916 + (NN) -14460 + (LL) 1428
1D Compatibility (HY) -19600 + (ID) 4800
Total energy: -204826.0 ( -131.47 by residue)
QMean score : 0.577
(partial model without unconserved sides chains):
PDB file :
Tito_1ZLY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZLY-query.scw
PDB file :
Tito_Scwrl_1ZLY.pdb
: