Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MKSKISEYTEKEFLEFVKDIYTNNKKKFPTEESHIQAVLEFKKLTEHPSGSDLLYYPNENREDSPAGVVKEVKEWRASKGLPGFKAG
1UNK Chain:A ((1-87))
MELKNSISDYTEAEFVQLLKEIEKENVA--ATDDVLDVLLEHFVKITEHPDGTDLIYYPSDNRDDSPEGIVKEIKEWRAANGKPGFKQG
General information:
TITO was launched using:
RESULT:
Template:
1UNK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3494 for 551 contacts (-6.3/contact) +
2D Compatibility (PS) -9161 + (NN) -7740 + (LL) 196
1D Compatibility (HY) -6400 + (ID) 2200
Total energy: -28799.0 ( -52.27 by residue)
QMean score : 0.676
(partial model without unconserved sides chains):
PDB file :
Tito_1UNK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UNK-query.scw
PDB file :
Tito_Scwrl_1UNK.pdb
: