Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADREVGTVKWFNDAKGYGFIQ---RDSGP-----DVFVHYRAIRGEGHRSLVEGQKVEFSVIQGQKGLQAEDVSKV
3ULJ Chain:A ((8-79))
---RGSGHCKWFNVRMGFGFISMTSREGSPLENPVDVFVHQSKLYMEGFRSLKEGEPVEFTFKKSSKGFESLRVTGP
General information:
TITO was launched using:
RESULT:
Template:
3ULJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35762 for 409 contacts (-87.4/contact) +
2D Compatibility (PS) -6862 + (NN) -1198 + (LL) 276
1D Compatibility (HY) -4800 + (ID) 1500
Total energy: -49846.0 ( -121.87 by residue)
QMean score : 0.695
(partial model without unconserved sides chains):
PDB file :
Tito_3ULJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ULJ-query.scw
PDB file :
Tito_Scwrl_3ULJ.pdb
: