Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MPDLSTWNLTIPQGRPAITISTSQLQRDYRSDYFQRTADGIRFWVPVNGSHTRNSEFPRSELRETLSSGRPYNWRYARADNWLEATLRIEAVPSTRRMIIGQIHSDGSNSGQAAPLVKL------LYQLRLDQGRVQALVRERPDDGGTRAYTLMDGIPLGQPFSYRIGVSRSGLLSVSVNGSALEQQLDPQWAYQGLYFKAGLYLQ---------DNRGPSSEGGRATFSELRVSHQ-------------- |
| 1J1T Chain:A ((6-233)) | STIPSSITSGSIFDLEGDNPNPLVDDSTLVF-VPLEAQHITPNGNGWRHEYKVKESLRVA---------------------MTQTYEVFEATVKVEMSDGG-KTIISQHHA--SDTGTISKVYVSDTDESGFNDSVANNGIFDVYVRLRNTSGNEEKFAL-GTMTSGETFNLRV-VNNYGDVEVTAFGNSFGIPVEDD---SQSYFKFGNYLQSQDPYTLDKCGEAGNSNSFKNCFEDLGITESKVTMTNVTYTRETN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J1T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63465 for 1504 contacts (-42.2/contact) +
2D Compatibility (PS) -20363 + (NN) -5040 + (LL) 1252
1D Compatibility (HY) -9200 + (ID) 2100
Total energy: -98916.0 ( -65.77 by residue)
QMean score : 0.291
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