Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------MSSEPLEPNQDVIIPRSRDSLGRPVYKAQLTRTDNQSE----------KVALIRQTAPLPVIFIPGIMGTNLR--NKADKSEVWRPPNGLWPMDDLFA-----SIGALWTWAWRGPKARQELLKAEQVEVDDQGTIDVGQSGLSEEAARL---RGWG---KVMRSAYNPVMGLME----RRLDNIVSRRELQAWWNDEALSPPGDQGEEQ--------GKVGPIDEEELLRASRYQFDVWCAGYN----------------------WLQS--NRQSALDVRDYIENT------------VLPFYQKECGLDPEQMRRM-----KVILVTHSMGGLVARALTQLHGYERVLGVVHGVQPA--TGSSTIYHHMRCGYEGIAQVVLGRNAGEVTAIVANSAGALELAPSAEYREGRPWLFLCDAQGQVLKDIDG-----------KPRA-------YPQNQDPYEEIYKNTTWYGLVPEQNSQYL-DMSDKKEGL-----RVGPRDNFEDLIDSIANFHGELSA-------AGYHSETYAHYGADDSRHSWRDLIWKGDPT-PLETPGATLNDDENGTYNSWFRRGLPTIVQ------------GPLETGNPLDASGSGGDETVPTD---------SGQAPALAGVKASFRHGSKGKGQAN--TKRGYEHQESYNDARAQWAALYGVIKITQLADWHPNDKGGT------------------------- |
| 3S28 Chain:A ((27-807)) | NEVLALLSRVEAKGKGILQQNQIIAEFEALPEQTRKKLEGGPFFDLLKSTQEAIVLPPWVALAVRPRPGVWEYLRVNLHALVVEELQPAEFLHFKEELVDGVKNGNFTLELDFEPFNASIPRPTLHKYIGNGVDFLNRHLSAKLFHDKESLLPLLKFLRLHSHQGKNLMLSEKIQNLNTLQHTLRKAEEYLAELKS-ETLYEEFEAKFEEIGLERGWGDNAERVLDMIRLLLDLLEAPDPCTLETFLGR--VPMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVT-QCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITST-FQEIAGSKE-TVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGK-NTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYGFWKHVSNLDRLEARRYLEMFYALKYRPLAQAVPLAQD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S28.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5828 for 4140 contacts (1.4/contact) +
2D Compatibility (PS) -59645 + (NN) -16350 + (LL) 560
1D Compatibility (HY) -21600 + (ID) 4250
Total energy: -95457.0 ( -23.06 by residue)
QMean score : 0.239
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