Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MLVAIHGLIHRLGLYGEHLEGAL-VNDSEALYAHPATYYRREDLLPAFESNEALRERFFGGVKK--PIFTSANAHNHLVGLAEVLAMYLLVWSPAPWRLVRLEPPPGLDARHAQRFAGERRHIEAFRDGLPRVARALAHISSLMIFDDHDITDDWNLSARWELTAYGHPFSRRIIGNALLAYLLCQGWGNDPQHCGEWLAPVAALMEGAAADGRLPCAEQDRLLDALLDFQHWHYRLPGSPTLIVLDTRTRRWRSERNLGRPSGLMDWEALSEFQQDLLGEKAAIIVSPAPMFGVKLIEGV---QKLFSWIGQPLLVDAENWMAHRGAASVMMNIFRHSRTPGNYLILSGDVHYSFVY-DIRIRHRERGPRL---WQITSSGIK-------NEFPRRLLDWFDRLNRWLYAPWSPLNWLTQRRSLEIRPRVPQHSQAGERLWNSAGIGQVFIG------EDGRPRAVLQVNADGSPATAFERHRDVE--DERADQSPVAPGR---------------- |
| 2Q06 Chain:A ((22-496)) | ATEIRASVGRMVGGIGRFYIQMCTELKLSDQEGRLIQNSITIERM-VLSAFDER---RNRYKDPKKTGGPIYRRRDGK---------WVRELILYDKEEIRRIWRQANNGEDAT----------------AGLTHMMIWHSNLNDATYQRTRALVRT-GMDPRMCSLMQGSTLPRR-----------SGAAGAAIKGVGTMVMELIRMIKRGINDRNF--WRGENGRRTRIAYERMCNILKGKFQTAAQKAMMDQVRESRNPG-NAEIEDLIFLARSALILRGSIAHKSCLPACVYGLAVASGYDFEREGYSLVGIDPFRLLQN--------SQVFSLIRPNENPAHKSQLVWMACHSAAFEDLRVSSFIRGTRVIPRGQLSTRGVQIASNENVEAMDSSTLELRSR--YWAIRTRSGGNTNQQRASAGQISVQPTFSVQRNLPFERATIMAAFKGNTEGRTSDMRTEIIRMMESARPEDVSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAEEY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q06.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104197 for 3288 contacts (-31.7/contact) +
2D Compatibility (PS) -43853 + (NN) -2005 + (LL) 4944
1D Compatibility (HY) -8400 + (ID) 3950
Total energy: -157461.0 ( -47.89 by residue)
QMean score : 0.214
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