Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELFKEFTFESAHRLPHVPEGHKCGRLHGHSFRVAIHIEGEVDPHTGWIRDFAEIKAIFKPIYEQLDHNYLNDIPGLENPTSENLCRWIWQQLKPLLPELSKVRVHETCTSGCEYRGD
3QNA Chain:D ((26-140))
--LFKDFTFEAAHRLPHVPEGHKAGRLHGHSFMVRLEITGEVDPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCIYRG-
General information:
TITO was launched using:
RESULT:
Template:
3QNA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75995 for 796 contacts (-95.5/contact) +
2D Compatibility (PS) -12494 + (NN) -6852 + (LL) 236
1D Compatibility (HY) -12800 + (ID) 4400
Total energy: -112305.0 ( -141.09 by residue)
QMean score : 0.593
(partial model without unconserved sides chains):
PDB file :
Tito_3QNA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QNA-query.scw
PDB file :
Tito_Scwrl_3QNA.pdb
: