Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------------MTFNRVVCGKLSWFIQAGGSMPSLIMDIALSGERLQAIYGGRANRVLLRSRDG--------------------------RRVNLPA--HHLRPFIGHDGVHGTFRLDFSEDGRLLALQRLA
2QFE Chain:A ((10-148))
HSSGLVPRGSPYTLSKRINGKWSGQSAGGCGNFQETHKNNPIYQFHIEKTGPLLIELRGPRQYSVGFEVVTVSTLGDPGPHGFLRKSSGDYRCGFCYLELENIPSGIFNIIPSTFLPKQEGPFFLDFNSIIPIKITQLQ-
General information:
TITO was launched using:
RESULT:
Template:
2QFE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42091 for 627 contacts (-67.1/contact) +
2D Compatibility (PS) -9331 + (NN) 1789 + (LL) 144
1D Compatibility (HY) 800 + (ID) 900
Total energy: -49589.0 ( -79.09 by residue)
QMean score : 0.279
(partial model without unconserved sides chains):
PDB file :
Tito_2QFE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QFE-query.scw
PDB file :
Tito_Scwrl_2QFE.pdb
: