Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMATQGVFTLPANTRFGVTAFANSSGTQTVNVLVNNETAATFSGQSTNNAVIGTQVLNSGSSGKVQVQVSVNGRPSDLVSAQVILTNELNFALVGSEDGTDNDYNDAVVVINWPLG
2JDP Chain:D ((2-115))-ATQGVFTLPANTRFGVTAFANSAGTQTVNVLVNNETAATFSGQSTNNAVIGTQVLNSGSSGKVQVQVSVNGRPSDLVSAQVILTNELNFALVGSEDGTDNDYNDAVVVINWPLG


General information:
TITO was launched using:
RESULT:

Template: 2JDP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -46706 for 842 contacts (-55.5/contact) +
2D Compatibility (PS) -13103 + (NN) -10797 + (LL) 208
1D Compatibility (HY) -14000 + (ID) 5650
Total energy: -90048.0 ( -106.95 by residue)
QMean score : 0.685

(partial model without unconserved sides chains):
PDB file : Tito_2JDP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JDP-query.scw
PDB file : Tito_Scwrl_2JDP.pdb: