Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSHQERPLIGLLFSETGVTADIERSQRYGALLAVEQLNREGGVGGRPIETLSQDPGGDPDRYRLCAEDFIRNRGVRFLVGCYMSHTRKAVMPVVERADALLCYPTPYEG-F--EYSPNIVYGGPAPNQNSAPLAAYLIRHYG-ERVVFIGSDYIYPRESNHVMRHLYRQHGGTVLEEIYIPLYPSDDDVQRAVERIYQARADVVFSTVVGTGTAELYRAIARRYGDGRRPPIASLTTSEAEVAKMESDVAEGQVVVAPYFSSIDTAASRAFVQACHGFFPENATITAWAEAAYWQTLLLGRAAQAAGSWRVEDVQRHLYDICIDAPQGPVRVERQNNHSRLSSRIAEIDA--RGVFQVRWQSPEPIRPDPYVVVHNLDDWSASMGGGALP |
| 3IPC Chain:A ((2-346)) | ------DVVIAVGAPLTGPNAAFGAQIQKGAEQAAKDINAAGGINGEQIKIVLGDDVSDPKQGISVANKFVA-DGVKFVVGHANSGVSIPASEVYAENGILEITPAATNPVFTERGLWNTFRTCGRDDQQGGIAGKYLADHFKDAKVAIIHDKTPYGQGLADETKKAANAAGVTEVMYEGVNVGD--KDFSALISKMKEAGVSIIYWGGLHTEAGLIIRQAADQGLKA--KLVSGDGIVSNELASIAGDAVEGTLNTFGPDP-TLRPENKELVEKFKAA-GF--NPEAYTLYSYAAMQAIAGAAKAAGSVEPEKVAEALKKGSFPTALGEISFDEKGDPKLPGYVMYEWKKGPDGKFTYI------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IPC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -198977 for 3203 contacts (-62.1/contact) +
2D Compatibility (PS) -37014 + (NN) -17636 + (LL) 1252
1D Compatibility (HY) -2000 + (ID) 3150
Total energy: -257525.0 ( -80.40 by residue)
QMean score : 0.705
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