Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPRSPLFSQFPLHERLLKALESLSFSEPTPVQAAAIPKALEGHDLRVTAQTGSGKTAAFLLPLLHRLLAEDKPRSLARALILLPTRELAQQTLKEVERFAQFTF-IKACLITGGEDFKVQGARLRKNPEIIIGTPGRLLEQRNAGNLPLQDIEVLVLDEADRMLDMGFADDVLALANACPAERQTLLFSATHSGAGLNKVIAEVLREPQVLRLNQVGELNENVRQQVITADDVAHKEQLLQWLLSNETYTKAIVFTNTRVSADRLTGRLIANQHKVFVLHGEKDQKDRKLAIERLKQGAVKILVATDVAARGLDVEGLDLVINFDMPRSGDEYVHRIGRTGRAGAEGLAISLICHGDWNLMSSVERYLKQNFERRNIKELKAAYQGPKKLKASGKAAGSKKKKQDRKGAAAKPAAKRKPAARPKAGPSAVVSADGMAPLKRKKPTAE |
| 4CT4 Chain:B ((7-362)) | ------FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERL---DLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFP-LSVQKFMNSHLQKP--YEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQL------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CT4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215287 for 2919 contacts (-73.8/contact) +
2D Compatibility (PS) -38640 + (NN) -22480 + (LL) 4840
1D Compatibility (HY) -28800 + (ID) 5700
Total energy: -306067.0 ( -104.85 by residue)
QMean score : 0.547
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