Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKSFRHLVQALACLALLASASLQAQESRLDRILESGVLRVATTGDYKPFSYRTEEGGYAGFDVDMAQRLAESLGAKLVVVPTSWPNLMRDFADDRFDIAMSGISINLERQRQAYFSIPYLRDG--KTPITLCSEEARFQTLEQIDQPGVTAIVNPGGTNEKFARANLKKARILVHPDNVTIFQQIVDGKADLMMTDAIEARLQSRLHPELCAVHPQQPF--DFAEKAYLLP-RDEAFKRYVDQWLHIAEQSGLLRQRMEHWLEYRWPTAHGK |
| 3DEL Chain:B ((34-258)) | ------------------------------------EKFIVGTNATYPPFEFVDKRGEVVGFDIDLAREISNKLGKTLDVREFSFDALILNLKQHRIDAVITGMSITPSRLKEILMI-PYYGEEIKHLVLVFKGENK--HPL-PLTQ-YRSVAVQTGTYQEAYLQ-SLSEVHIRSFDSTLEVLMEVMHGKSPVAVLEPSIAQVVLKDFPALSTATIDLPEDQWVLGYGIGVASDRPALALKIEAAVQEIRKEGVLAELEQKWGLNNL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DEL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95780 for 1675 contacts (-57.2/contact) +
2D Compatibility (PS) -24698 + (NN) -12528 + (LL) 4220
1D Compatibility (HY) -11600 + (ID) 2150
Total energy: -142536.0 ( -85.10 by residue)
QMean score : 0.425
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