Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFSFHIPNMTCGGCAKTVTRILHGVD-PQARVETDPPRREARVESTLDKHAFLEALSEAGYPEGR
1CC8 Chain:A ((7-68))
-YQFNV-VMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVR-
General information:
TITO was launched using:
RESULT:
Template:
1CC8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32216 for 389 contacts (-82.8/contact) +
2D Compatibility (PS) -6368 + (NN) -4637 + (LL) 168
1D Compatibility (HY) -6000 + (ID) 700
Total energy: -49753.0 ( -127.90 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_1CC8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CC8-query.scw
PDB file :
Tito_Scwrl_1CC8.pdb
: