Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFR-------PRLLLTSLAIALGACSPQDPQAVTSAALAQQVILPTYS---RWVEADQAL-ASSALAYCQGK-EDLAK---ARDAFHAAQKAWAELQPLLIGP-------LAEGNRAWQVQFWPDKKDLVGRQVEQLLKNNPQVDAA----ALAKASVVVQGLSAY------EYILFDSKID-----LADAATKARYCPLLEAIGTHQQQ---LAQDILARWKNDGGMLTQMS-KFPNDRYADAHEAIAEL----LRVQVTAL-DM----LKKKL-GTPLGRQSKGIPQPYQAEAWRSNASLASLDASLSGAQALWEGIDGKGLKTLLPAEQKDLAGKIDAAYADSHAKLAALEQKPLSE----LLASEDGRNQLNALYDSLNVVHRLHE-GDLARALGVQLGFNANDGD---------------------- |
| 4Q6O Chain:A ((21-437)) | MIEKAPTNVEDRDKAPHLLLLAGIQGDE-----PGGFNATNLFLMHYSVLKGLVEVVPVLNKPSMLRNHRGLYGDMNRKFAALDKNDPEYPTIQEIKSLIAKPSIDAVLHLHDGGGYYR-PVYVDAMLNPKRWGNCFIIDQDEVKGAKFPNLLAFANNTIESINAHLLHPIEEYHLKNTRTAQGDTEMQKALTFYAINQKKSAFANEASKELPLASRVFYHLQAIEGLLNQLNIPFKRDFDLNPNSVHALINDKNLWAKISSLPKMPLFNLRPKLNHFPLPHNTK-IPQI----PIESNAYIVGLVKNKQEVFLKY----GNKLMTRLSPFYIEFDPSLEEVKMQIDNKDQMVKIGSVVEVKESFYIHAMDNIRANVIGFSVSNENKPNEAGYTIKFKDFQKRFSLDKQERIYRIEFYKNNAFSGMILVKFV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q6O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31556 for 2491 contacts (-12.7/contact) +
2D Compatibility (PS) -34650 + (NN) -4444 + (LL) 780
1D Compatibility (HY) -10800 + (ID) 3600
Total energy: -84270.0 ( -33.83 by residue)
QMean score : 0.071
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