Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MSVEAAKNARELLLKEYRAVLSTHSKKWPGFPFGSVVPYCLDAEGRPLILISRIAQHTHNLQADPRCSMLV--GERGAEDIQAVGRLTLLAEARQLAEEEVAAAAERYYRYFPESADYHRVHDFDFWVLQPVQWRFIGGFGAIHWLAAERVPLANPFAGEAERGMVEHMNSDHAAAIAHYVEL-AGLPAHA-AAQLAGIDTEGFHLRI----GQGLHWLPFPAACGNPGAVR---QALVQLARAERWPTVEPEQG--------- |
| 4N7R Chain:C ((48-299)) | STHKPFPAEVSRSIMELSSVGTLSTLTH--DGWPLGVGVRFAVDKDGTPVLCLNR------SVSPDKRSALHVQLEQCGLRTPQCTIQGSIG---RPGDDTVLKRLSATWREKFGEEVKEDSLYVVAVDRVLQMEDFMEDGIWVASSDYKNASP--DPLRDIAED-IVNQINANNMEDIFRFCNVYVDLDFVVSETKMIWMDRLGFDLRVWSPRGVYDVRIPFPMEVTDEKGAKSSFNGMSQLAWEVEKSYCPADFNKVKLLKQVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N7R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102905 for 1689 contacts (-60.9/contact) +
2D Compatibility (PS) -25115 + (NN) -13398 + (LL) 1368
1D Compatibility (HY) -6400 + (ID) 2100
Total energy: -148550.0 ( -87.95 by residue)
QMean score : 0.289
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