Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLLDIKNLSVRFGD-TTAVPVVDGLDLSVDKGEVLAIVGESGSGKSVTMMALMGLIDAPGWVSADHLRFDGHDMLTLK----GRQRRRIVGKDMAMVFQDPMTALNPSYTVGYQIEEVLRLHLGLRGKALRQRALELLERVEIPAAASRLDAYPHQLSGGMSQRVAIAMAIAAEPKLLIADEPTTALDVTIQAQIMELLLNLQRDQDMALILITHDLAVVAETAQRVCVMYAGEAVEIGGVPALFDRPTHPYTEALIKA-----IPEHCAGEARLATLPGIVPGRYDRPRGCLLSPRCPYAQEHCRQERPALETHERGAVRCFYPLNLLNEVA |
3TUI Chain:D ((24-274)) | --MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKS-TLIRCVNLLERP---TEGSVLVDGQELTTLSESELTKARRQI-----GMIFQH--FNLLSSRTVFGNVALPLELDNTPKDE-VKRRVTELLSLVGL---GDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDQATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPE------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TUI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193923 for 1977 contacts (-98.1/contact) +
2D Compatibility (PS) -26616 + (NN) -14366 + (LL) 4904
1D Compatibility (HY) -21200 + (ID) 4150
Total energy: -255351.0 ( -129.16 by residue)
QMean score : 0.504
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