Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQPQAFYRVVAEDFTAVDGIIRRQLTSRVPLVEKIGDYIISAGGKRLRPLLVLLAGKTLGYKGDDLCLL--AATIEFLHTSTLLHDDV--VDASGLRRGRSTANALWGNAPSVLVGDFLYARSFEMMVEL--GSMP--VMRIISQ-ATRVIAEGEVL-QLSKVRDASTTEE--TYMEVIRG-KTAMLFEASTHSAAALCQAGEEQSEALRRFGDYLGIAFQLVDDLLDYRGDAATLGKNVGDDLAEGKPTLPLIVTMRDGTEEQAALVRKAIQQGGSQDLESVCAAVEAAGALDYTANLARDYAARAIACLDTLPDNEYRSALVELSEFAVARTH |
| 3KRC Chain:D ((37-271)) | -------------------------------------YSLLAGGKRVRPMLCIAACELVG--GDESTAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHMAFGESVAVLAGDALLSFAFEHVAAATKGAPPERIVRVLGELAVSIGSEGLVAGQVVDVCSEGMAEVGLDHLEFIHHHKTAALLQGSVVLGAILGGGKEEEVAKLRKFANCIGLLFQVVDDILDVT------------------TTYPKLIGVEKSKEFADRLNREAQEQ------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KRC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73066 for 1580 contacts (-46.2/contact) +
2D Compatibility (PS) -21949 + (NN) -9577 + (LL) 8268
1D Compatibility (HY) -13600 + (ID) 3700
Total energy: -113624.0 ( -71.91 by residue)
QMean score : 0.323
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