Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIRRKTAVPRNAGAVLPMLACLAAQAAEGGFLEDAKTDLVLRNYYFNRDFRDHDAGKSLVDEWAQGFILKFSSGYTPGTVGVGLDAIGLFGV--KLNSGRGTSNSELLPLHDDGRAADNYGRVG-VAAKLRVSASELKIGEMLPDIPLLRYDDGRLLPQTFRGFAVVSRELPGLALQAGRFDAVSLRNSADMQDLSAWSAPTQKSDGFNYAGAEYRFNRERTQLGLWHGQLEDVYRQSYANLLHKQRVGDWTLGANLGLFVDRDDGAARAGEIDSHTVYGLFSAGIGLHTFYLGLQKVGGDSGWQSVYGSSGRSMGNDMFNGNFTNADERSWQVRYDYDFVGLGWPGLIGMVRYGHGSNATTKAGSGGKEWERDVELGYTVQSGPLARLNVRLNHASNRRSFNSDFDQTRLVVSYPLSW |
3SZV Chain:A ((11-400)) | -----------------------LYFQGLEDLVEDSHASLELRNFYFNRDFR---------DEWAQGFLLRLESGFSEGT--VGFGVDAIGLLGFKLDS------------------QDDYAKLGLT-AKARVSNSLLKVGALHFKSPLVSANDTRLLPELFRGALLDVQEIDGLTLRGAHLDRNKLNSSSDYQVFSANR-IGGRSDAFDFAGGDYRLT-PALTASLHQGRLKDIYRQTFAGLVHTLDLG-RSLKSDLRFARASEDGG--FRELDNRAFGALFSLRLGAHAVAAGYQRISGDDPYPYIAGS-DPYLVNFIQIGDFGNVDERSWQLRYDYDFGALGLPGLSFMSRYVSGDNVARGAANDGKEWERNTDLGYVVQSGPLKNLGVKWRNATVRSNFANDLDENRLILSYSLAL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3SZV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -381 for 2793 contacts (-0.1/contact) +
2D Compatibility (PS) -37167 + (NN) -3745 + (LL) 3056
1D Compatibility (HY) -26000 + (ID) 7550
Total energy: -71787.0 ( -25.70 by residue)
QMean score : 0.210
|
|
|