Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRTLHVDLGERSYPIYIGENLLGDARWFAPHIVG-RRVAVISNETVAPLYLETLLKALQGHEVTPVVLPDGEAYKQWETLQLIFDVLLKERHDRKTTLIALGGGVIGDMAGFAAACYQRGVNFIQVPTTLLSQVDSSVGGKTGINHPLGKNMIGAFYQPQAVVIDTASLKTLPSRELSAGLAEVIKYGFICDEPFITWLEAHMDALLALEP-TVVTEAIERSCAAKARVVGADERESGVRATLNLGHTFGHAIETQQGYGVWLHGEAVGAGTVMALEMSHRLGWLSAAERDRGIRLLRRAGLPVVPPAEMTAEDFMEHMAVDKKVLDGRLRLVLLQGLGNAVVTGDFPREILDATLRTDYRALADQLGDE |
1XAH Chain:B ((10-334)) | ----------NNYPIYVEH---GAIKYIGTYLNQFDQSFLLIDEYVNQYFANKFD------NVHKVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGATGDFAGFVAATLLRGVHFIQVPTTILAH-DSSVGGKVGINSKQGKNLIGAFYRPTAVIYDLDFLKTLPFKQILSGYAEVYKHALLNGESATQDIEQHFKDREILQSLNGMDKYIAKGIETKLDIVVADEKEQGVRKFLNLGHTFGHAVEY---YHKIPHGHAVMVGIIYQFIVANAL-FDSKHDISHYIQYLIQLGYPLD--------TLYQYML--------GVQMVLMRQFGDIVV--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XAH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -189779 for 2518 contacts (-75.4/contact) +
2D Compatibility (PS) -31856 + (NN) -4755 + (LL) 3864
1D Compatibility (HY) -26800 + (ID) 5800
Total energy: -255126.0 ( -101.32 by residue)
QMean score : 0.413
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