Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFNTEVQPGICMEPDAITQEYVFNHTMLRVKDPKRSLDFYSRVLGMRLLRRLDFEEGRFSLYFLAMTRGEEVPDAVDERQRYTFGRQSVLELTHNWGSESDDSQ-YHNGNQDPRGFGHICFSVPDLVAACERFETLGVNFVKPLDRG-MKNVAFISDPDGYWVEIVQASLNGEMGRG
1BH5 Chain:D ((13-174))
-----EAALSCCSDADPSTKDFLLQETMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIQIL-----------
General information:
TITO was launched using:
RESULT:
Template:
1BH5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74346 for 1025 contacts (-72.5/contact) +
2D Compatibility (PS) -17404 + (NN) -10745 + (LL) 512
1D Compatibility (HY) -18000 + (ID) 4450
Total energy: -124433.0 ( -121.40 by residue)
QMean score : 0.459
(partial model without unconserved sides chains):
PDB file :
Tito_1BH5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BH5-query.scw
PDB file :
Tito_Scwrl_1BH5.pdb
: