Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSLQAKILDPRLGSDFPLPQYATPGSAGLDLRAMLKEDSVLGPGQTLLIPTGLSIYIADPGLAALVLPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSCWNRGESPFTIAVGERIAQLVLVPVVQAHFELVEAFDESQRGAGGFGHSGSH
3EHW Chain:C ((30-164))
-----------RLSEHATAPTRGSARAAGYDLYSAY--DYTIPPMEKAVVKTDIQIALPS-GCYGRVAPRSGLAAKHFIDVG--AGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQALDDTERGSGGFGSTGKN
General information:
TITO was launched using:
RESULT:
Template:
3EHW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91714 for 857 contacts (-107.0/contact) +
2D Compatibility (PS) -14489 + (NN) -5198 + (LL) 1016
1D Compatibility (HY) -7600 + (ID) 2450
Total energy: -120435.0 ( -140.53 by residue)
QMean score : 0.381
(partial model without unconserved sides chains):
PDB file :
Tito_3EHW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EHW-query.scw
PDB file :
Tito_Scwrl_3EHW.pdb
: