Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVGQDVMRCLMALGLVLQGLSFGAQAAPGGAVELYRYVNDKGVVVLDRQGVPPQYIGKGYQVLNDQGRVIRTVPPAPTAEELRQRKAAQAQASSDAQLLRLYSSLEDVDRARERRLAELDGLSSVARGNLQSLKLQQANLQGQAANQERAGRPVAQALVDQLDDLKQEEKRLQGEIGRFQKAREDAERTYAADRARLSQLLGVSP |
4PAS Chain:B ((1-39)) | --------------------------------------------------------------------------------------------------------------------------------------------------------SVNQASTSRLEGLQSENHHLRMKITELDKDLEEVTMQLQ-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PAS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3383 for 147 contacts (23.0/contact) +
2D Compatibility (PS) -4584 + (NN) -3013 + (LL) 11484
1D Compatibility (HY) -2000 + (ID) 500
Total energy: 4770.0 ( 32.45 by residue)
QMean score : 0.694
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