Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTALNVLIYPDDHLKVVCEPVTKVNDAIRKIVDDMFDTMYQEKGIGLAAPQVDILQRIITIDVEGDKQNQFVLINPEILASEGETGIEEGCLSIPGFRALVPRKEKVTVRALDRDGKEFTLDADGLLAICIQHEIDHLNGILFVDYLSPLKRQRIKEKLIKYKKQIAKS
2W3U Chain:A ((1-165))
-SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLK---
General information:
TITO was launched using:
RESULT:
Template:
2W3U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99497 for 1289 contacts (-77.2/contact) +
2D Compatibility (PS) -17635 + (NN) -4996 + (LL) 388
1D Compatibility (HY) -19200 + (ID) 5400
Total energy: -146340.0 ( -113.53 by residue)
QMean score : 0.580
(partial model without unconserved sides chains):
PDB file :
Tito_2W3U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W3U-query.scw
PDB file :
Tito_Scwrl_2W3U.pdb
: