Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METNFSTPLNEY--EEVSYESAGYTVLRILPLVVLGVTFVLGVLGNGLVIW-VAGFRMTRTVTTICYLNLALADFSFTATLPFLIVSMAMGEKWPFGWFLCKLIHIVVDINLFGSVFLIGFIALDRCICVLHPVWAQNHRTVSLAMKVIVGPWILALVLTLPVFLFLTTVTIP-NGDTYCTFNFAS----WGGTPEERLKVAITMLTARGIIRFVIGFSLPMSIVAICYG----LIAAKIHKKGMIKSSRPLRVLTAV----VASFFICWFPFQLVALLGTVWLKEMLFYGKYKIIDILVNPTSSLAFFNSCLNPMLYVFVGQDFRERLIHSLPTSLERALSEDSAPTNDTAANSASPPAETELQAM |
| 4RWD Chain:A ((98-400)) | ---QLKTTRNAYIQKYLGARSASSLALAIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLM-ETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVM--AVTRPRDGAVVCMLQFPSPSWYWD--------------TVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTL----VDIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -254831 for 2080 contacts (-122.5/contact) +
2D Compatibility (PS) -28685 + (NN) 391 + (LL) 3628
1D Compatibility (HY) -25600 + (ID) 4650
Total energy: -309747.0 ( -148.92 by residue)
QMean score : 0.132
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